BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B02LP1|AL429511
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig45 632 0.0
3x_Contig486 165 2e-40
3x_Contig1773 141 3e-33
3x_Contig1807 133 7e-31
3x_Contig1796 125 2e-28
3x_Contig1614 100 9e-21
>3x_Contig45
Length = 1029
Score = 632 bits (319), Expect = 0.0
Identities = 451/491 (91%), Gaps = 3/491 (0%)
Strand = Plus / Minus
Query: 413 aaatatactgtagtgtaaactccatctctttcttgagctttagcagattcagcatagata 472
||||||||||| |||||||| ||||||||| || | ||||||||||||||||||| |
Sbjct: 532 aaatatactgtggtgtaaacaccatctcttactaaaaaattagcagattcagcatagaaa 473
Query: 473 aaatcagcgatctctaactatactttcgtttacttgaaaatt-gaaaatgaaa-aataaa 530
|||||| || | |||||||||||| | | ||||||||| ||||||| || ||||||
Sbjct: 472 aaatcaacgctaactaactatacttacataaacttgaaaaaaagaaaatggaagaataaa 413
Query: 531 aaaagagatttgaaggtgcatgtgattacccggacataaaattacgattgaacaacggat 590
||||||||| | ||| | ||| ||||||| ||| | ||||||||| ||||||| |||
Sbjct: 412 aaaagagatataaagatacatatgattacaaagacgtgtaattacgatagaacaacagat 353
Query: 591 tggaaagtagtggatggaagataactgtgggtaagaaaatcaagggaggaacaaatgagg 650
| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 352 tagaaagtagtggatggaagataactgtgggtaagaaaatcaagggagaaaaaaatgagg 293
Query: 651 ggaggcgaattttcagttcacgtgattgaaggtcaatgttacccggaagtggaggacaaa 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggaggcgaattttcagttcacgtgattgaaggtcaatgttacccggaagtggaggacaaa 233
Query: 711 cccgaaga-aagttgtaaaaatgcaagagaaaggcagataggggagaagagagtaagagt 769
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cccgaagggaagttgtaaaaatgcaagagaaaggcagataggggagaagagagtaagagt 173
Query: 770 ggagtaagaggcacgtgatatgcgataaagcgggttaactgcatgaggtgaggaaggaag 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ggagtaagaggcacgtgatatgcgataaagcgggttaactgcatgaggtgaggaaggaag 113
Query: 830 taattttaaatgaggtttggtggcaagagaagcagaaatgggagatgtgggatgggaatt 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 taattttaaatgaggtttggtggcaagagaagcagaaatgggagatgtgggatgggaatt 53
Query: 890 gtttgtgcggg 900
|||||||||||
Sbjct: 52 gtttgtgcggg 42
Score = 319 bits (161), Expect = 5e-87
Identities = 327/381 (85%), Gaps = 1/381 (0%)
Strand = Plus / Minus
Query: 7 aaaactacgatgctggctataccaatcgccgccgacgaaaccagtgaagctctggccagg 66
|||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| ||
Sbjct: 939 aaaactacgatgctggctatgccaatcgccgccgacgtaaccagaaaagctctggccggg 880
Query: 67 caattgaccacttgtgtggatctaccgacctgtacctcggtccaggcaaattggtcttgc 126
| | | ||| ||||| |||||||||||||||| ||||||||||||| |||||||||
Sbjct: 879 cgaaaaaaaactaatgtgggtctaccgacctgtaccacggtccaggcaaaatggtcttgc 820
Query: 127 gagactccttgctcgtaattaaaagaggtactgctgcacatccctaagttagccaagaaa 186
||||| ||| | ||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 819 gagacacctaaaacataattaaaaaagataatgctgcacatccctaagttagccaagaaa 760
Query: 187 atgatgccataattaacacttcaatcaacgtcggcctccataaaatttatctcggcatct 246
|||| ||||| || ||||||||||||||||||||||| ||||||||| | | ||||||
Sbjct: 759 atgaagccatgataaacacttcaatcaacgtcggcctacataaaattaaaataagcatct 700
Query: 247 atacgctgcacatacgcacacaattgaatcaatagaaaacag-aatgtgatgaatcaatg 305
||||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||| |
Sbjct: 699 atacgctgcacatacacacacttttgaatcaatcgaaaacagaaatgtgatgaatcaaag 640
Query: 306 cattataggggtcaaggattattaatacaggagtaagtattaaatgaaacgaaaatatta 365
|||| ||| |||||| ||||||||||||| |||||| ||||| || ||| | |||
Sbjct: 639 aattaacgggatcaagggttattaatacaggcgtaagttttaaaaaaagcgagggtgtta 580
Query: 366 ataccgtcaaagggagcatag 386
|||||||||||||||||||||
Sbjct: 579 ataccgtcaaagggagcatag 559
>3x_Contig486
Length = 1939
Score = 165 bits (83), Expect = 2e-40
Identities = 116/127 (91%)
Strand = Plus / Minus
Query: 774 taagaggcacgtgatatgcgataaagcgggttaactgcatgaggtgaggaaggaagtaat 833
||||||||||||||| | | |||||| || |||||| ||||||||||||||||||||||
Sbjct: 1240 taagaggcacgtgatgtacagtaaagcagggtaactgaatgaggtgaggaaggaagtaat 1181
Query: 834 tttaaatgaggtttggtggcaagagaagcagaaatgggagatgtgggatgggaattgttt 893
||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 1180 tttaaatgaagtttggtggcaagagaagcagaaatgggagatgtggaatgggtattcttt 1121
Query: 894 gtgcggg 900
|||||||
Sbjct: 1120 gtgcggg 1114
>3x_Contig1773
Length = 8694
Score = 141 bits (71), Expect = 3e-33
Identities = 74/75 (98%)
Strand = Plus / Minus
Query: 826 gaagtaattttaaatgaggtttggtggcaagagaagcagaaatgggagatgtgggatggg 885
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 gaagtaattttaaatgaagtttggtggcaagagaagcagaaatgggagatgtgggatggg 1334
Query: 886 aattgtttgtgcggg 900
|||||||||||||||
Sbjct: 1333 aattgtttgtgcggg 1319
>3x_Contig1807
Length = 66587
Score = 133 bits (67), Expect = 7e-31
Identities = 73/75 (97%)
Strand = Plus / Minus
Query: 826 gaagtaattttaaatgaggtttggtggcaagagaagcagaaatgggagatgtgggatggg 885
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 gaagtaattttcaatgaagtttggtggcaagagaagcagaaatgggagatgtgggatggg 1404
Query: 886 aattgtttgtgcggg 900
|||||||||||||||
Sbjct: 1403 aattgtttgtgcggg 1389
>3x_Contig1796
Length = 24558
Score = 125 bits (63), Expect = 2e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 826 gaagtaattttaaatgaggtttggtggcaagagaagcagaaatgggagatgtgggatggg 885
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1623 gaagtaattttaaatgaagtttggtggcaagagaagcagaaatgggagatgtggaatggg 1564
Query: 886 aattgtttgtgcggg 900
||||||||||||||
Sbjct: 1563 tattgtttgtgcggg 1549
>3x_Contig1614
Length = 4869
Score = 99.6 bits (50), Expect = 9e-21
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 826 gaagtaattttaaatgaggtttggtggcaagagaagcagaaatgggagatgtgg 879
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1345 gaagtaattttaaatgaagtttggtggcaagagaagcagaaatgggagatgtgg 1292
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7188
Number of Sequences: 1807
Number of extensions: 7188
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 6
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)